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Introduction to trophic SDM3 years ago
Install and load webSDM | Simulate data | Create trophic interaction network | Fit trophic SDM | A trophicSDMfit object | Analyse a fitted trophicSDM | MCMC convergence | Parameter estimates and interpretation | Analysis of local models | Predictions with trophic SDM | Model evaluation | AIC, loo | Interpolation | Cross-validation | Potential niche | Author | References
Subtle and obvious differences between SDM and trophic SDM3 years ago
Compare trophic and classical SDMs: difference and equalities | The simplest case | Simulation | Does this always hold? | Non-linear relationship between prey and predator | Non-continuous observable entities (presence-absence, counts) | Simulations | Non-linear statistical model
ORCHAMP_dataset3 years ago
Fitting and evaluating a join trait distribution model | Installing the R package | Fit a jtdm to data | Get parameters | Predict and evaluate model fit | Trait-environment relationships | Multivariate confidence intervals | Joint predictions | Author
Composite variables and biotic-abiotic interactions4 years ago
Composite variables | Composite variables and groups of preys | Custom formula | On computeVariableImportance with composite variable | Interaction with biotic and abiotic terms